Software

7-Zip is a file archiver with a high compression ratio.

Version: 7-Zip 16.04 [64-bit]

Website: http://www.7-zip.org/

Adobe Acrobat is used to view, create, manipulate, print and manage files in Portable Document Format (PDF).

Version: Adobe Acrobat XI Version 11.0.20

Website: https://helpx.adobe.com/acrobat/11/user-guide.html

Adobe Digital Editions is an ebook reader software program. It is used for acquiring, managing, and reading eBooks, digital newspapers, and other digital publications.

Version: Adobe Digital Editions Version 4.5.6.177148

Website: https://www.adobe.com/solutions/ebook/digital-editions.html

Vector graphics editor. Adobe Illustrator is the companion product of Adobe Photoshop. Photoshop is primarily geared toward digital photo manipulation and photorealistic styles of computer illustration, while Illustrator provides results in the typesetting and logo graphic areas of design. Both are part of the Adobe Creative Cloud suite of software.

Video editing software. Premiere Pro supports high resolution video editing at up to 10,240 × 8,192 resolution, at up to 32-bits per channel color, in both RGB and YUV. Audio sample-level editing, VST audio plug-in support, and 5.1 surround sound mixing are available. Premiere Pro's plug-in architecture enables it to import and export formats beyond those supported by QuickTime or DirectShow, supporting a wide variety of video and audio file formats and codecs on both MacOS and Windows. Part of the Adobe Creative Cloud suite of software.

Blender is open-source 3D computer graphics software used for creating animated films, visual effects, art, 3D printed models, interactive 3D applications and video games.

Version: Blender 2.79

Website: https://www.blender.org/

Explore vectors and math in 3D.

Drawing tool for chemists and biologists to create publication-ready, scientifically intelligent drawings for use in ELNs, databases and publications and for querying chemical databases.

Version: ChemDraw 16.0.1.4 (77)

Website: http://www.cambridgesoft.com/Ensemble_for_Chemistry/ChemDraw/ChemDrawProfessional/Default.aspx

Chimera X is the next-generation molecular visualization program that has experimental VR support

For more information, please visit: https://www.rbvi.ucsf.edu/chimerax/docs/user/vr.html

A demo of 3D data plotting in a virtual environment.

Digital audio workstation for OS X that allows users to create music or podcasts. Enables users to create multiple tracks with pre-made MIDI keyboards, pre-made loops, an array of various instrumental effects, and voice recordings. GarageBand supports many sound formats, though notably not MP3 and those that are at 8-bits or lower.

Web browser.

Version: Google Chrome Version 64.0.3282.186 (Official Build) (64-bit)

Website: https://www.google.com/chrome/

ImageJ is a public domain, Java-based image processing program developed at the National Institutes of Health. ImageJ was designed with an open architecture that provides extensibility via Java plugins and recordable macros. Custom acquisition, analysis and processing plugins can be developed using ImageJ's built-in editor and a Java compiler. User-written plugins make it possible to solve many image processing and analysis problems, from three-dimensional live-cell imaging to radiological image processing, multiple imaging system data comparisons to automated hematology systems. ImageJ's plugin architecture and built-in development environment has made it a popular platform for teaching image processing.

Version: ImageJ 1.50i

Website: https://imagej.nih.gov/ij/

Open-source vector graphics editor.

Version: Inkscape 0.92.1 r15371

Website: https://inkscape.org/en/

Audio and video player. Used to play, download, and organize digital downloads of music and video.

Version: iTunes 12.7.0.166

Website: https://www.apple.com/itunes/

Presentation software.

TeX editor.

Explore mars in this interestig simulation.

MATLAB (matrix laboratory) is a multi-paradigm numerical computing environment and fourth-generation programming language. A proprietary programming language developed by MathWorks, MATLAB allows matrix manipulations, plotting of functionsand data, implementation of algorithms, creation of user interfaces, and interfacing with programs written in other languages, including C, C++, C#, Java, Fortran and Python.

Version: MATLAB R2017a (9.2.0.538062)

Website: https://www.mathworks.com/products/matlab.html

MeshLab is an advanced 3D mesh processing software system that is oriented to the management and processing of unstructured large meshes and provides a set of tools for editing, cleaning, healing, inspecting, rendering, and converting these kinds of meshes.

Version: MeshLab 2016

Website: http://www.meshlab.net/

Microsoft applications: Word (writing and editing), Excel (spreadsheets), Powerpoint (presentations), Access (database), Publisher (page layout and design).

Diagramming and vector graphics application.

MiKTeX is a distribution of the typesetting system LaTeX for Microsoft Windows. It consists of an implementation of TeX and a set of related programs. MiKTeX provides the tools necessary to prepare documents using the TeX/LaTeXmarkup language, as well as a simple tex editor (TeXworks).

Version: TeXworks Version 0.6.2 (MiKTeX 2.9.6350)

Website: https://miktex.org/

Take a guided journey through the amazing TRAPPIST-1 star system in VR, known to be the home of 7 Earth-size exoplanets orbiting a star that is only a little larger than Jupiter. This experience is based on the best current understanding of what these worlds could be like given their sizes, densities, and proximity to their star. While the planetary images are artistic extrapolations, the relative sizes and positions are all portrayed accurately.

This experience was developed by the IPAC Communications & Education group and has been released in conjunction with the 15th anniversary of NASA’s Spitzer Space Telescope mission. Spitzer, along with a number of other observatories on Earth and in Space, has contributed to our understanding of the TRAPPIST-1 system. NASA's Jet Propulsion Laboratory manages the Spitzer Space Telescope mission for NASA's Science Mission Directorate. Science operations are conducted at the Spitzer Science Center at Caltech.

Notepad++ is a text editor and source code editor for use with Microsoft Windows. Unlike Microsoft Notepad, the built-in Windows text editor, it supports tabbed editing, which allows working with multiple open files in a single window. The project's name comes from the C increment operator.

Version: Notepad++ v7.5.1

Website: https://notepad-plus-plus.org/

OpenSCAD is a free software application for creating solid 3D CAD objects. It is a script only based modeller, with a specific description language.

Website: http://www.openscad.org/

Word processor.

A database of inorganic diffraction data from crystals and powders produced by the International Centre for Diffraction Data® (ICDD®), a non-profit scientific organization dedicated to collecting, editing, publishing, and distributing powder diffraction data for the identification of materials. This comprehensive collection of inorganic materials is in a standardized format that can be rapidly searched for unknown phase identification. It is designed to support automated quantitative analyses by providing key reference data required for these analyses. It also contains an array of tools that supplement conventional analyses, such as a full suite of data simulation programs enabling the analysis of neutron, electron, and synchrotron data, in addition to conventional X-ray data.

Python is a widely used high-level, general-purpose, interpreted, dynamic programming language. Its design philososphy emphasizes code readability, and its syntax allows programmers to express concepts in fewer lines of code than possible in languages such as C++ or Java.

Version: Python 2.7.14

Website: https://www.python.org/

R;is a programming language and software environment for statistical computing and graphics supported by the R Foundation for Statistical Computing.

Version: R 3.4.0

Website: https://www.r-project.org/

With Scientific WorkPlace Version 5, you can create, edit, and typeset mathematical and scientific text more easily than ever before. The software is based on an easy-to-use word processor that completely integrates writing mathematics and text in the same environment. With the built-in computer algebra system, you can perform computations right on the screen.

In Scientific WorkPlace, you can typeset complex technical documents with LaTeX, the industry standard for mathematics typesetting. Because of its superior precision and quality, publishers and writers of scientific material use LaTeX extensively. When you typeset, LaTeX automatically generates footnotes, indexes, bibliographies, tables of contents, and cross-references.

You don't have to learn LaTeX to produce typeset documents. Many of the more than 150 document shells have been designed to meet the typesetting requirements of specific professional journals and institutions. Scientific WorkPlace automatically saves your documents as LaTeX files. You can concentrate on writing a correct paper; Scientific WorkPlace makes it a beautiful one.

Version: Scientific WorkPlace 5.00 Build 2552

Website: https://www.mackichan.com/index.html?products/swp.html~mainFrame

Interactively sculpt 3D objects and export for 3D printing

SolidWorks is a solid modeling computer-aided design (CAD) and computer-aided engineering (CAE) computer program that runs on Microsoft Windows.

Version: SolidWorks 2016-2017 / 2016 SP5.0

Website: http://www.solidworks.com/

TeXnicCenter is a free editor (IDE) for developing LaTeX documents under Windows.

Version: TeXnicCenter 2.02 Stable

Website: http://www.texniccenter.org/

Implement custom 3D environments with the Unity game engine.  We have the licensed educational edition.

Visualize and render molecular objects and proteins using Visual Molecular Dynamics (VMD) from the University of Illinois at Urbana-Champaign.

WinSCP (Windows Secure Copy) is a free and open-source SFTP, FTP, WebDAV and SCP client for Microsoft Windows. Its main function is secure file transfer between a local and a remote computer. Beyond this, WinSCP offers basic file manager and file synchronization functionality. For secure transfers, it uses Secure Shell (SSH) and supports the SCP protocol in addition to SFTP.

Version: WinSCP Version 5.11.1 (Build 7725)

Website: https://winscp.net/eng/download.php

Xcode is an integrated development environment (IDE) containing a suite of software development tools developed by Apple for developing software for macOS, iOS, WatchOS and tvOS.